Population genomics reveals how 5 ka of human occupancy led the Lima leaf-toed gecko (Phyllodactylus sentosus) to the brink of extinction.

Small species with high home fidelity, high ecological specialization or low vagility are particularly prone to suffer from habitat modification and fragmentation. The Lima leaf-toed gecko (Phyllodactylus sentosus) is a critically endangered Peruvian species that shelters mostly in pre-Incan archeological areas called huacas, where the original environmental conditions are maintained. We used genotyping by sequencing to understand the population genomic history of P. sentosus. We found low genetic diversity (He 0.0406-0.134 and nucleotide diversity 0.0812-0.145) and deviations of the observed heterozygosity relative to the expected heterozygosity in some populations (Fis - 0.0202 to 0.0187). In all analyses, a clear population structuring was observed that cannot be explained by isolation by distance alone. Also, low levels of historical gene flow were observed between most populations, which decreased as shown in contemporary migration rate analysis. Demographic inference suggests these populations experienced bottleneck events during the last 5 ka. These results indicate that habitat modification since pre-Incan civilizations severely affected these populations, which currently face even more drastic urbanization threats. Finally, our predictions show that this species could become extinct in a decade without further intervention, which calls for urgent conservation actions being undertaken.

Comparative Mitogenome Analysis of Two Native Apple Snail Species (Ampullariidae, Pomacea) from Peruvian Amazon.

Apple snails of the genus Pomacea Perry, 1810 (Mollusca: Caenogastropoda: Ampullariidae) are native to the Neotropics and exhibit high species diversity, holding cultural and ecological significance as an important protein source in Peru. However, most genetic studies in Pomacea have focused mostly on invasive species, especially in Southeast Asia, where they are considered important pests. In this study, we assembled and annotated the mitochondrial genomes of two Pomacea species native to the Peruvian Amazon: Pomacea reevei Ampuero & Ramírez, 2023 and Pomacea aulanieri (Deville & Hupé, 1850). The mitogenomes of P. reevei and P. aulanieri comprise 15,660 and 16,096 bp, respectively, and contain the typical 37 genes of the animal mitochondria with a large control region of 292 bp in P. reevei and 524 bp in P. aulanieri-which fall within the range of what is currently known in Pomacea. Comparisons with previously published mitogenomes in Pomacea revealed differences in the overlapping of adjacent genes, the size of certain protein-coding genes (PCGs) and the secondary structure of some tRNAs that are consistent with the phylogenetic relationships between these species. These findings provide valuable insights into the systematics and genomics of the genus Pomacea.

Description of two new species of apple snail (Ampullariidae: Pomacea) from Peruvian Amazonia.

Two new species of apple snails are described, Pomacea penai sp. nov. and Pomacea reevei sp. nov. that are used as food resources in Peruvian Amazonia. We used anatomical and conchological features to diagnose these two species. Pomacea penai sp. nov. is characterized by a highly variable shell morphology, spire that is prominent to immersed, apical penis sheath gland covering 1/3 penis sheath and elongated basal gland, prostate broad proximally, reduced stomach septum, green eggs, and commonly inhabits temporary flooded areas, creeks, and oxbow lakes. Pomacea reevei sp. nov. possesses a large shell, ranging from 81-137 mm, grey broad penis sheath, small apical penis sheath gland and the basal gland covering 1/3 penis sheath, tall stomach septum, white eggs, and found in deep lentic water bodies.

Who is Andesiops peruvianus (Ulmer, 1920) (Ephemeroptera: Baetidae)? New insight from the type basin using morphological and molecular analyses.

Andesiops peruvianus (Ulmer, 1920) is a small minnow mayfly with a distribution throughout the Andes Mountains, mainly in lotic environments. In recent years, the taxonomic status of the species has been shifting, even finding out molecular and morphological evidence to consider it as a cryptic species. In this work, we collected seven specimens of A. peruvianus from the Lake Titicaca in Peru, the type locality and perform molecular and morphological analyses to test their relationship with specimens from other regions. The species delimitation analysis revealed the existence of five MOTUs for specimens identified as A. peruvianus along the Andes Mountains, while the Lake Titicaca specimens formed a single MOTU with high interspecific distance. In this MOTU were found specimens with different types of abdominal gills, from translucent to markedly tracheated supporting the hypothesis of phenotypic plasticity at the abdominal gill level. Also, an extension in the range of tarsal claw denticles, from 10-12 to 10-14, were observed, higher than what were found in other regions. Our results support A. peruvianus as a species complex and reveal A. peruvianus from Titicaca as a single MOTU. Future morphological revisions of topotype specimens as well as from other Andean regions are required to strengthen the diagnosis of informative characteristics at both the larval and adult stage to elucidate the real status of the species.

Fishes from Yarinacocha lake: an emblematic Amazonian ecosystem in the lower Ucayali River basin, Pucallpa, Peru / Peixes do lago Yarinacocha: um ecossistema amazônico emblemático na bacia do baixo rio Ucayali, Pucallpa, Peru

The Yarinacocha lake is an emblematic ecosystem of the Peruvian Amazon, representing the main point of fish landing and a tourist attraction in the city of Pucallpa. The wide fauna diversity in this area has made it the target of various studies, although for fish species most of them were focused on commercial species. In this work, we carried out the first ichthyofauna species inventory of the Yarinacocha lake, sampling throughout the entire lake during the rainy and dry seasons and considering also all previously recorded species deposited in the Ichthyological Collection of the MUSM with the same locality. A total of 164 fish species were recorded, representing 10 orders (plus Eupercaria), 34 families and 116 genera. Characiformes was the order with more species (68 spp., 41.5%) followed by Siluriformes (59 spp., 36%), Cichliformes (17 spp., 10.5%), and Gymnotiformes (8 spp., 4.9%). The most highly represented families, including almost 55.5% of the total diversity obtained, were Characidae (23 spp., 14%), followed by Cichlidae (17 spp., 10.4%), Loricariidae (14 spp., 8.5%), Pimelodidae (13 spp., 7.9%), Doradidae (13 spp., 7.4%) and Anostomidae (12 spp., 7.3%). From the total fish species recorded in this study, only 22 are considered protected species following the IUCN criteria and 109 species have commercial importance, including 90 ornamental species (54.8%). Our results contribute to the knowledge of the ichthyofauna of the Yarinacocha lake and can be used as a starting point for its conservation and sustainable management over time.

O lago Yarinacocha é um ecossistema emblemático da Amazônia peruana, representando o principal ponto de desembarque de peixes e também uma atração turística da cidade de Pucallpa. A grande diversidade faunística nesta área a tornou alvo de vários estudos, embora para as espécies de peixes a maioria deles tenha sido focada em espécies comerciais. Neste trabalho, realizamos o primeiro inventário da ictiofauna do lago Yarinacocha, amostrando todo o lago durante as estações chuvosa e seca, e também considerando todas as espécies depositadas na Coleção Ictiológica do MUSM dessa localidade. Um total de 164 espécies de peixes foram registradas, representando 10 ordens (mais Eupercaria), 34 famílias e 116 gêneros. Characiformes foi a ordem com mais espécies (68 espécies, 41,5%), seguida por Siluriformes (59 espécies, 36%), Cichliformes (17 espécies, 10,5%) e Gymnotiformes (8 espécies, 4,9%). As famílias mais representadas, incluindo quase 55,5% da diversidade total obtida, foram Characidae (23 spp., 14%), seguido por Cichlidae (17 spp., 10,4%), Loricariidae (14 spp., 8,5%), Pimelodidae (13 spp., 7,9%), Doradidae (13 spp., 7,4%) e Anostomidae (12 spp., 7,3%). Do total de espécies de peixes registradas neste estudo, apenas 22 são consideradas espécies protegidas seguindo os critérios da IUCN e 109 espécies têm importância comercial, incluindo 90 espécies ornamentais (54,8%). Nossos resultados contribuem para o conhecimento da ictiofauna do lago Yarinacocha e podem ser utilizados como ponto de partida para sua conservação e manejo sustentável ao longo do tempo.

Diversity and distribution of mosquitoes (Diptera: Culicidae) in Peru and their relationship with metaxenic diseases / Diversidad y distribución de mosquitos (Diptera: Culicidae) en el Perú y su relación con las enfermedades metaxénicas

Abstract Introduction: Tropical Andean and Amazonian ecosystems shape the great biodiversity found in Peru. However, studies on mosquitoes (Diptera: Culicidae) in the country are scarce, resulting in an information gap regarding their diversity, ecology, distribution, and abundance. Objective: To search for documented evidence on the diversity and distribution of mosquitoes (Diptera: Culicidae) in Peru, and to establish -in relation to species of medical relevance- their potential link with the epidemiological cycle of some metaxenic diseases. Materials and methods: A literature review was conducted in Google Scholar, ScienceDirect, PubMed, and SciELO, as well as in 7 databases specialized in insect taxonomy, using specific terms and their combinations by means of Boolean operators ("AND" and "OR"). Search strategy: study types: original research articles, review articles, books, and book chapters; publication period: no initial date - June 2020; languages: English, Spanish, and Portuguese. Results: A total of 99 studies were retrieved after the initial search, 84 in the 4 electronic databases and 15 in the specialized databases, of which 41 met the inclusion criteria. One additional record was included due to its relevance to the objective of the review. The studies included were original articles (n=28), review articles (n=6), books (n=5), book chapters (n=2), and undergraduate theses (n=1). Regarding the language of publication, 25 (59.52%) were published in English and 17 (40.48%) in Spanish. Conclusions: In Peru, the greatest diversity of mosquito genera is found in the departments of Loreto, Huánuco, and Madre de Dios. Knowledge of the diversity of mosquitoes in Peru that have the potential to cause health issues is relatively scarce and is focused on Aedes aegypti and some species of the Anopheles and Culex genera, thus overlooking a rich diversity distributed in the Amazonian forests, high jungle, and inter-Andean valleys.

Resumen Introducción. Los ecosistemas tropicales andinos y amazónicos determinan la gran biodiversidad presente en Perú. Sin embargo, los estudios sobre mosquitos (Diptera: Culicidae) en el país son escasos, lo que resulta en un vacío de información en cuanto a su diversidad, ecología, distribución y abundancia. Objetivos. Buscar evidencia documentada sobre la diversidad y la distribución de mosquitos en el Perú, y establecer -con relación a las especies de importancia médica- su potencial vínculo con el ciclo epidemiológico de algunas enfermedades metaxénicas. Materiales y métodos. Se realizó una revisión de la literatura en Google Académico, ScienceDirect, PubMed y Scielo, así como en siete bases de datos especializadas en taxonomía de insectos, usando términos específicos y diferentes combinaciones con operadores booleanos ("AND" y "OR"). Estrategia de búsqueda: tipos de estudios: artículos originales de investigación, artículos de revisión, libros y capítulos de libros; periodo de publicación: sin límite inicial a junio del 2020; idiomas: inglés, español y portugués. Resultados. La búsqueda inicial arrojó 99 estudios, 84 en las 4 bases de datos electrónicas y 15 en las bases de datos especializadas, de los cuales 41 cumplieron los criterios de inclusión. También se incluyó un registro adicional debido a su relevancia con el objetivo de la revisión. Los estudios incluidos fueron artículos originales (n=28), artículos de revisión (n=6), libros (n=5), capítulos de libro (n=2) y tesis de pregrado (n=1). Respecto al idioma de publicación, 25 (59.52%) estaban en inglés y 17 (40.48%), en español. Conclusiones. En Perú, la mayor diversidad de géneros de mosquitos se encuentra presente en los departamentos de Loreto, Huánuco y Madre de Dios. El conocimiento sobre la diversidad de mosquitos en Perú que tienen el potencial de generar problemas de salud es relativamente escaso y se centra en el Aedes aegypti y algunas especies de los géneros Anopheles y Culex, dejando de lado una rica diversidad distribuida en los bosques amazónicos, la selva alta y los valles interandinos.

First National Record for Culex iridescens in Peru.

On October 9, 2019, mosquito collections were conducted to update the mosquito species of medical importance in the Apurímac River Valley, Canayre, in the state of Ayacucho, Peru. Species collected included Culex (Carrollia) iridescens, which had been previously reported only in Colombia, Ecuador, and Brazil, this being the first national report of this species in Peru and the first species within the genus Culex in Ayacucho. With the addition of Cx. iridescens to the mosquito fauna of Peru, there are currently 182 species in the country. Specimens collected during this study were deposited in the Entomological Collection of the Natural History Museum of the National University of San Cristobal Huamanga in Ayacucho, Peru.

Identificación molecular y relaciones evolutivas de Pomacea nobilis, base para la autenticación específica del churo negro de la Amazonia peruana / Molecular identification and evolutionary relationships of Pomacea nobilis, basis for the specific authentication of the black apple snail from Peruvian Amazonia

Resumen En la Amazonia Peruana los caracoles dulceacuícolas de la familia Ampullariidae son conocidos como churos y originalmente han sido descritas para Perú alrededor de 20 especies. Aunque son muy usadas para alimentación, medicina tradicional y objeto de muchos estudios para su cultivo e industrialización, solamente es mencionada en la literatura la especie Pomacea maculata. Se llevó a cabo la identificación molecular sobre la base del marcador mitocondrial COI, de individuos de churos negros (Pomacea) comercializados en los mercados de Iquitos, así como los usados en platos a la carta en la ciudad de Lima, contrastados con otros individuos de procedencia de su hábitat natural. Se encontró que estos especímenes expendidos corresponden a la especie Pomacea nobilis (Reeve, 1856). El análisis filogenético molecular mostró que P. nobilis es especie hermana de P. guyanensis, en el grupo de P. glauca, distantemente relacionada de P. maculata. Las distancias no corregidas encontradas entre ellas, para el marcador mitocondrial COI, fueron de 11.33% a 13.17%, mientras que con P. maculata fueron de 13.67% a 15.33%. Estos resultados demostraron la eficacia del código de barras de ADN para la identificación y autenticación de la especie, lo que le da un valor agregado para su eventual comercio de exportación.

Abstract In the Peruvian Amazon, freshwater snails of the Ampullariidae family are known as churos, and around 20 species have originally been described for Peru. Although they are widely used for food, traditional medicine and the object of many studies for their cultivation and industrialization, only the species Pomacea maculata is mentioned in the literature. Molecular identification was carried out based on the mitochondrial marker COI of individuals of "churo negro" apple snails (Pomacea) commercialized in the markets of Iquitos, as well as those used in restaurant dishes in the city of Lima, and contrasted with specimens from their natural habitat. It was found that these specimens, correspond to the species Pomacea nobilis (Reeve, 1856). The molecular phylogenetic analysis showed P. nobilis as the sister species of P. guyanensis, in the P. glauca group, distantly related to P. maculata. The uncorrected distances found between them, for the mitochondrial marker COI, were from 11.33% to 13.17%, while with P. maculate were from 13.67% to 15.33%. These results demonstrated the effectiveness of the DNA barcode for the identification and authentication of the species, which gives it added value for its eventual export trade.